I’ve included a few ideas about where to stay for the last few nights of your trip below. You’ll see the Hotel Indigo mentioned a couple of times because they have a good balance of price and location, and I get resort credits there. I also really like the Hoshinoya/KAI brand hotels for quality. Some of these hotels have onsen hot springs, but not all. However, there are many public onsen across Japan. Right now, the Hotel Indigo in Hakone or any of the options in Karuizawa are looking good to me.
Rates listed are for the full three nights unless otherwise noted.
Hiking and hot springs in a mountain getaway near Tokyo. Lots of museums and interesting activities. You can read my day in Hakone itinerary from the Hideaway Report here.
Surfing near Tokyo with Mt. Fuji backdrop.
Mountain views and hikes from Fujiyoshida, the closest town to the sacred mountain.
Ski town in Nagano area only 70 min train ride from Tokyo. Hiking and nature walks in summer. Elevation will make it cooler.
Get monthly travel news, destination guides, and seasonal offers delivered to your inbox.